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2020 addgene 154474 software  (Addgene inc)


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    Addgene inc 2020 addgene 154474 software
    2020 Addgene 154474 Software, supplied by Addgene inc, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/2020+addgene+154474+software/pLX303-ABI1-dCas9+(Plasmid+%23154474)/pm35016035-315-17-18
    Average 92 stars, based on 1 article reviews
    2020 addgene 154474 software - by Bioz Stars, 2026-09
    92/100 stars

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    Software:

    Article Title: Identification and functional characterization of transcriptional activators in human cells.
    Article Snippet: HEK293T: pLX301-TetO7-TRE3G(NA)EGFP-Nanoluc, EF1alpha-mCherry; single colony; clone 2 This paper N/A HEK293T: pLX301-TetO7-TRE3G(NA)EGFP-Nanoluc, EF1alpha-mCherry; single colony; clone 3 This paper N/A HEK293T: pHR-TRE3G-EGFP (Gift from Stanley Qi’s lab, Stanford); Clonal line co-expressing pLX303-ABI-dCas9 (blasticidin) and gRNA targeting TRE3G promoter (EBFP2) This paper N/A HEK293T: pHR-TRE3G-EGFP Gao et al., 2016 N/A Oligonucleotides pTRE3G gRNA: GTACGTTCTC TATCACTGATA Gao et al., 2016 N/A ORFeome nested PCR 1 forward: CGAC TCACTATAGGGAGACCCAAG This paper N/A ORFeome nested PCR 1 reverse: ATT CATCTTGCGTTGGTGCTCC This paper N/A ORFeome nested PCR 2 forward: CAGT GTGGTGGAATTCTGCAG This paper N/A ORFeome nested PCR 2 reverse: CCGC CACTGTGCTGGATATC This paper N/A TADseq Gateway forward: GGGGACA ACTTTGTACAAAAAAGTTGG CGGAGGCAGGGTAGCGATG This paper N/A TADseq Gateway reverse: GGGGACAA CTTTGTACAAGAAAGTTGGGTAGCC TTCGCTTCCACCACTTCCACC This paper N/A TADseq R1 sequencing primer (PAGE purified): GGAATTCTGCAGATATC AACAAGTTTGTACAAAAAAGTTGGC This paper N/A Recombinant DNA pSTV6-TetO-ccdB-eGFP Piette et al., 2021 N/A pcDNA5-FRT-TO-ccdB-BirA2-FLAG This paper N/A pOG44 Invitrogen N/A pX459 Addgene Addgene 48139 psPAX2 Addgene Addgene 12260 VSV-G Addgene Addgene 12259 pcDNA3.1-ccdB-3xFLAG-V5 Taipale et al., 2012 Addgene 87063 pcDNA3.1-3xFLAG-V5-ccdB Taipale et al., 2012 Addgene 87064 pcDNA3.1-ccdB-EGFP N/A N/A pcDNA3.1-ccdB-PYL1, SV40-RFP This paper N/A pcDNA3.1-ccdB-TagRFP-PYL1 This paper N/A (Continued on next page) Molecular Cell 82, 677–695.e1–e7, February 3, 2022 e2 .. REAGENT or RESOURCE SOURCE IDENTIFIER pCDNA3.4-ccdB-rTetR This paper N/A pLX301-ccdB-PYL1 This paper N/A pLX303-ABI1-dCas9 Alerasool et al., 2020 Addgene 154474 Software and algorithms MS data storage and analysis: ProHits Liu et al., 2016 N/A MS Data, Significance Analysis of INTeractome analysis: SAINT Teo et al., 2014 Version 3.6.1 ProteoWizard http://proteowizard.sourceforge.net/ N/A Mascot http://www.matrixscience.com Version 2.3.02 Comet Eng et al., 2013 Version 2012.02rev.0 Network visualization: Cytoscape Shannon et al., 2003 Version 3.6.1 G:Profiler Raudvere et al., 2019 https://biit.cs.ut.ee/gprofiler/gost Adobe Illustrator Adobe 2021 GraphPad Prism GraphPad Version 9.0 FlowJo BD Biosciences Version 10.8 STAR aligner https://github.com/alexdobin/STAR Version 2.7.8a edgeR https://bioinf.wehi.edu.au/edgeR/ Version 3.14 Bowtie http://bowtie-bio.sourceforge.net Version 1.2.3 Bowtie2 http://bowtie-bio.sourceforge.net/bowtie2 Version 0.10 CnR-Flow https://cnr-flow.readthedocs.io N/A Nextflow Di Tommaso et al., 2017 N/A Bedtools https://bedtools.readthedocs.io Version 2.29.2 Deeptools https://deeptools.readthedocs.io Version 2.5.7 GenomicRanges https://bioconductor.org/ packages/GenomicRanges Version 1.46 MACS https://chipster.csc.fi/manual/macs2.html Version 2.2.7 Other TripleTOF 5600 AB Sciex N/A Countess II Automated Cell Counter Invitrogen AMQAX1000 Thermal Cycler C1000 BioRad N/A MicroChemi 4.2 Bio-Imaging Systems N/A ..

    Magnetic Cell Separation:

    Article Title: Identification and functional characterization of transcriptional activators in human cells.
    Article Snippet: HEK293T: pLX301-TetO7-TRE3G(NA)EGFP-Nanoluc, EF1alpha-mCherry; single colony; clone 2 This paper N/A HEK293T: pLX301-TetO7-TRE3G(NA)EGFP-Nanoluc, EF1alpha-mCherry; single colony; clone 3 This paper N/A HEK293T: pHR-TRE3G-EGFP (Gift from Stanley Qi’s lab, Stanford); Clonal line co-expressing pLX303-ABI-dCas9 (blasticidin) and gRNA targeting TRE3G promoter (EBFP2) This paper N/A HEK293T: pHR-TRE3G-EGFP Gao et al., 2016 N/A Oligonucleotides pTRE3G gRNA: GTACGTTCTC TATCACTGATA Gao et al., 2016 N/A ORFeome nested PCR 1 forward: CGAC TCACTATAGGGAGACCCAAG This paper N/A ORFeome nested PCR 1 reverse: ATT CATCTTGCGTTGGTGCTCC This paper N/A ORFeome nested PCR 2 forward: CAGT GTGGTGGAATTCTGCAG This paper N/A ORFeome nested PCR 2 reverse: CCGC CACTGTGCTGGATATC This paper N/A TADseq Gateway forward: GGGGACA ACTTTGTACAAAAAAGTTGG CGGAGGCAGGGTAGCGATG This paper N/A TADseq Gateway reverse: GGGGACAA CTTTGTACAAGAAAGTTGGGTAGCC TTCGCTTCCACCACTTCCACC This paper N/A TADseq R1 sequencing primer (PAGE purified): GGAATTCTGCAGATATC AACAAGTTTGTACAAAAAAGTTGGC This paper N/A Recombinant DNA pSTV6-TetO-ccdB-eGFP Piette et al., 2021 N/A pcDNA5-FRT-TO-ccdB-BirA2-FLAG This paper N/A pOG44 Invitrogen N/A pX459 Addgene Addgene 48139 psPAX2 Addgene Addgene 12260 VSV-G Addgene Addgene 12259 pcDNA3.1-ccdB-3xFLAG-V5 Taipale et al., 2012 Addgene 87063 pcDNA3.1-3xFLAG-V5-ccdB Taipale et al., 2012 Addgene 87064 pcDNA3.1-ccdB-EGFP N/A N/A pcDNA3.1-ccdB-PYL1, SV40-RFP This paper N/A pcDNA3.1-ccdB-TagRFP-PYL1 This paper N/A (Continued on next page) Molecular Cell 82, 677–695.e1–e7, February 3, 2022 e2 .. REAGENT or RESOURCE SOURCE IDENTIFIER pCDNA3.4-ccdB-rTetR This paper N/A pLX301-ccdB-PYL1 This paper N/A pLX303-ABI1-dCas9 Alerasool et al., 2020 Addgene 154474 Software and algorithms MS data storage and analysis: ProHits Liu et al., 2016 N/A MS Data, Significance Analysis of INTeractome analysis: SAINT Teo et al., 2014 Version 3.6.1 ProteoWizard http://proteowizard.sourceforge.net/ N/A Mascot http://www.matrixscience.com Version 2.3.02 Comet Eng et al., 2013 Version 2012.02rev.0 Network visualization: Cytoscape Shannon et al., 2003 Version 3.6.1 G:Profiler Raudvere et al., 2019 https://biit.cs.ut.ee/gprofiler/gost Adobe Illustrator Adobe 2021 GraphPad Prism GraphPad Version 9.0 FlowJo BD Biosciences Version 10.8 STAR aligner https://github.com/alexdobin/STAR Version 2.7.8a edgeR https://bioinf.wehi.edu.au/edgeR/ Version 3.14 Bowtie http://bowtie-bio.sourceforge.net Version 1.2.3 Bowtie2 http://bowtie-bio.sourceforge.net/bowtie2 Version 0.10 CnR-Flow https://cnr-flow.readthedocs.io N/A Nextflow Di Tommaso et al., 2017 N/A Bedtools https://bedtools.readthedocs.io Version 2.29.2 Deeptools https://deeptools.readthedocs.io Version 2.5.7 GenomicRanges https://bioconductor.org/ packages/GenomicRanges Version 1.46 MACS https://chipster.csc.fi/manual/macs2.html Version 2.2.7 Other TripleTOF 5600 AB Sciex N/A Countess II Automated Cell Counter Invitrogen AMQAX1000 Thermal Cycler C1000 BioRad N/A MicroChemi 4.2 Bio-Imaging Systems N/A ..



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    2020 addgene 154474 software  (Addgene inc)
    92
    Addgene inc 2020 addgene 154474 software
    2020 Addgene 154474 Software, supplied by Addgene inc, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/2020+addgene+154474+software/pLX303-ABI1-dCas9+(Plasmid+%23154474)/pm35016035-315-17-18
    Average 92 stars, based on 1 article reviews
    2020 addgene 154474 software - by Bioz Stars, 2026-09
    92/100 stars
    		  Buy from Supplier

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